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It Was Probably the Fructans, Not the Gluten

Why gluten-free diets help IBS sufferers โ€” and why the reason isn't what most people think.

5 October 2024ยท5 min read

A lot of people with IBS try going gluten-free and feel noticeably better. Then they conclude they're gluten-sensitive. It's a reasonable conclusion โ€” but it's probably wrong.

In 2017, researchers at Monash University ran a double-blind crossover trial on 59 people who believed they had non-coeliac gluten sensitivity. Each participant cycled through three diets: high gluten, low gluten, and low fructan. The result was clear. Fructans โ€” not gluten โ€” triggered significantly more bloating, gut pain and wind. On the low-fructan diet, symptoms dropped substantially. On the gluten variations, not so much.

Why gluten-free still works

Most foods that contain gluten also contain fructans. Wheat, rye, barley โ€” they're all high-fructan grains. When you remove gluten from your diet, you're also removing fructans. Symptoms improve, and gluten gets the credit.

This matters practically because gluten-free and low-fructan are not the same thing. Gluten-free products often contain:

  • โ€”Apple or pear juice (high fructose)
  • โ€”Honey (high fructose)
  • โ€”Inulin โ€” a fructan added as a prebiotic fibre for texture and gut health marketing
  • โ€”Chicory root extract โ€” another fructan source

A gluten-free bread made with inulin can trigger IBS symptoms as reliably as regular bread. The label says gluten-free. The FODMAP content says otherwise.

The sourdough exception

Traditional sourdough is often tolerated by IBS sufferers even though it's made from wheat. The long fermentation process โ€” 8โ€“12 hours with a live culture โ€” allows bacteria in the dough to break down most of the fructans before the bread reaches you. By the time it's baked, the fructan content is substantially lower.

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This only applies to genuine sourdough โ€” bread made with a starter culture and long fermentation. Most supermarket "sourdough" is regular bread with a small amount of vinegar added for flavour. Check that the ingredients list only flour, water, salt, and starter culture.

What this means for testing

If you've never done a proper FODMAP elimination and reintroduction, you don't actually know whether gluten is a problem for you. (If you have coeliac disease, that's a different situation โ€” coeliac is an immune response to gluten itself and requires strict avoidance regardless.) For everyone else, the fructan reintroduction test โ€” not the gluten one โ€” is the relevant experiment.

The practical upside: if fructans rather than gluten are the issue, your dietary restrictions are different and often more manageable. Gluten-free means avoiding a protein found in many grains. Low-fructan means watching specific foods โ€” but at the right serving sizes, many gluten-containing foods (sourdough, small amounts of pasta) may still be on the table.